Most recent process flow for academic writing

Just for the record, I thought I’d repost my comment here that I’ve just left on Christian Tietze’s blog concerning on how I go about outlining and writing on the back of Zettelkasten notes these days.

My latest process flow on Windows 7 for academic writing, using 3 monitors, so some of this software could be viewed simultaneously:

1) read the literature (usually PDF articles or books);

2) take reading notes (mainly quotes + interpretation) in ConnectedText as Zettelkasten;

3) use VUE to develop a concept map to make sense of the material, while reviewing the CT notes in floating windows (i.e. multiple notes can be viewed simultaneously);

4) develop an outline for the paper in a Freeplane mind map, building on the VUE concept map and adding hyperlinks to selected quotes and notes in ConnectedText, so they can be easily called up when writing about a given point;

5) write in plain text using Markdown in WriteMonkey (distraction-free writing software), while checking off nodes in the Freeplane outline as they get written up, and paste in raw EndNote code for academic references, where necessary;

6) paste draft into Outline 4D (single-pane outliner with inline notes) and reverse outline it, i.e. add a heading to each paragraph to see the overall logical structure and content of the paper, and edit it accordingly to improve coherence, eliminate redundancy etc.

7) Import into MS Word, do final editing, add final headings, table of contents, and convert raw EndNote code into formatted references and bibliography.

Alternative Natara Bonsai download site

My blog stats tell me that there is a steady stream of visitors looking for Natara Bonsai, ever since the main download site has disappeared a few months ago. It seems that there is still at least one site where Bonsai 5 Desktop Edition can be downloaded from (and there may very well be some others out there). I don’t know whether this site is legitimate, so download anything at your own risk, and make sure you scan the file for viruses. However, I know of at least one reader who has done so, and he sounded happy. Here is the link: It seems to be some sort of a mirror of the original site, as it looks identical. If you do not have a license, you could try to contact the administrator of the Natara blog to find out if it is still possible to purchase one.

Natara Bonsai

Natara Bonsai is one of my old time favourites. While there are some other capable outliners out there, when I need to analyse textual data in long and complex lists, none are as easy and fast to use as Bonsai. The last version I have is v. 5.0.3 Build 3233. I run it on a Win 7, 64-bit machine, and it works perfectly.